Association of Polymorphism +874 T/A Interferon Gamma Gene with Susceptibility to Pulmonary Tuberculosis in Medan, Indonesia

Authors

  • Sri Melinda Kaban Master Program in Tropical Medicine, Faculty of Medicine, Universitas Sumatera Utara, Medan, Indonesia https://orcid.org/0000-0003-2854-6630
  • Bintang Yinke Magdalena Sinaga Departement of Pulmonology and Respirology Medicine, Faculty of Medicine, Universitas Sumatera Utara, Medan, Indonesia
  • Tetty Aman Nasution Department of Microbiology, Faculty of Medicine, Universitas Sumatera Utara, Medan, Indonesia

DOI:

https://doi.org/10.3889/oamjms.2021.6480

Keywords:

Polymorphism, Interferon gamma, pulmonary tuberculosis

Abstract

BACKGROUND: Pulmonary tuberculosis (TB) is still a disease that concerns in the world due to its high incidence, especially in developing countries, including Indonesia. Polymorphism +874 T/A interferon-gamma (IFN-γ) is one of the host genetic factors that have been widely studied and has been shown to be associated with susceptibility to pulmonary TB.

AIM: This study aims to determine the association polymorphism +874 T/A IFN-γ gene with susceptibility to pulmonary TB in Medan population.

METHODS: A total of 82 pulmonary TB patients and 85 healthy controls were examined in this case–control study. SPSS 25 is used to process and analyze all data where the Pearson Chi-square is used to analyze the association between genotype and susceptibility to pulmonary TB.

RESULTS: The polymorphism +874 T/A IFN-γ gene was not significantly associated with susceptibility to pulmonary TB in patients compared to controls (p = 0.395) and there was no association between allele frequency and susceptibility to pulmonary TB (p = 0.158).

CONCLUSION: Our study suggests no association of polymorphism +874 T/A IFN-γ gene with pulmonary TB in Medan, Sumatera Utara, Indonesia.

Downloads

Download data is not yet available.

Metrics

Metrics Loading ...

Plum Analytics Artifact Widget Block

References

World Health Organization. Global Tuberculosis Report. Geneva: World Health Organization; 2018. p. 265.

Bellamy R. Genetic susceptibility to tuberculosis in human populations. Thorax. 1998;53(7):588-93. PMid:9797760 DOI: https://doi.org/10.1136/thx.53.7.588

Hopewell PC, Kato-Maeda M, Ernst JD. Murray and Nadel’s Textbook of Respiratory Medicine. Netherlands: Elsevier; 2016. https://doi.org/10.1016/b978-1-4557-3383-5.00035-x DOI: https://doi.org/10.1016/B978-1-4557-3383-5.00035-X

Lee J, Kornfeld H. Interferon-γ regulates the death of M. tuberculosis-infected macrophages. J Cell Death. 2010;3:1-11. PMid:21072140 DOI: https://doi.org/10.4137/JCD.S2822

Wahyuniati N. Peran interferon gamma pada infeksi Mycobacterium tuberculosis. J Kedokteran Syiah Kuala. 2017;17(2):126-32. https://doi.org/10.24815/jks.v17i2.8992 DOI: https://doi.org/10.24815/jks.v17i2.8992

Abbas A, Lichtman A, Pillai S. Differentiation and Functions of CD4+ Effector T Cells Cellular and Molecular Immunology. Ch. 10. Philadelphia, PA: Elsevier; 2018. P. 225-242.

Sallakci N, Coskun M, Berber Z, Gürkan F, Kocamaz H, Uysal G, et al. Interferon-γ gene+874T-A polymorphism is associated with tuberculosis and gamma interferon response. Tuberculosis. 2007;87(3):225-30. https://doi.org/10.1016/j.tube.2006.10.002 PMid:17276141 DOI: https://doi.org/10.1016/j.tube.2006.10.002

Pravica V, Perrey C, Stevens A, Lee JH, Hutchinson IV. A single nucleotide polymorphism in the first intron of the human IFNgene: Absolute correlation with a polymorphic CA microsatellite marker of high IFN-production. Hum Immunol. 2000;61:863-6. https://doi.org/10.1016/s0198-8859(00)00167-1 DOI: https://doi.org/10.1016/S0198-8859(00)00167-1

Equilibrium Hardy-Weinberg-WpCalc. Available from: https://www.wpcalc.com/en/equilibrium-hardy-weinberg. [Last accessed on 2020 Aug 21].

Yim JJ, Selvaraj P. Genetic susceptibility in tuberculosis. Respirology. 2010;15(2):241-56. PMid:20199642 DOI: https://doi.org/10.1111/j.1440-1843.2009.01690.x

Hwang JH, Kim EJ, Kim SY, Lee SH, Suh GY, Kwon OJ, et al. Polymorphisms of interferon-γ and interferon-γ receptor 1 genes and pulmonary tuberculosis in Koreans. Respirology. 2007;12(6):906-10. https://doi.org/10.1111/j.1440-1843.2007.01171.x PMid:17986123 DOI: https://doi.org/10.1111/j.1440-1843.2007.01171.x

Lee SW, Chuang TY, Huang HH, Lee KF, Chen TT, Kao YH, et al. Interferon gamma polymorphisms associated with susceptibility to tuberculosis in a Han Taiwanese population. J Microbiol Immunol Infect. 2015;48(4):376-80. https://doi.org/10.1016/j.jmii.2013.11.009 PMid:24529854 DOI: https://doi.org/10.1016/j.jmii.2013.11.009

Ding S, Li L, Zhu X. Polymorphism of the interferon-γ gene and risk of tuberculosis in a southeastern Chinese population. Hum Immunol. 2008;69(2):129-33. PMid:18361939 DOI: https://doi.org/10.1016/j.humimm.2007.11.006

Amim LH, Pacheco AG, Fonseca-Costa J, Loredo CS, Rabahi MF, Melo MH, et al. Role of IFN-γ +874 T/A single nucleotide polymorphism in the tuberculosis outcome among Brazilians subjects. Mol Biol Rep. 2008;35(4):563-6. https://doi.org/10.1007/s11033-007-9123-1 PMid:17682837 DOI: https://doi.org/10.1007/s11033-007-9123-1

Naz AG, Ali M, Aslam MA, Khan AU, Manzoor H, Iqbal R, et al. Influence of single-nucleotide polymorphisms in the IFNG towards susceptibility to tuberculosis in a Pakistani population. Ann Hum Genet. 2019;83(6):426-33. https://doi.org/10.1111/ahg.12325 PMid:31069794 DOI: https://doi.org/10.1111/ahg.12325

Mabunda N, Alvarado-Arnez LE, Vubil A, Mariamo A, Pacheco AG, Jani IV, et al. Gene polymorphisms in patients with pulmonary tuberculosis from Mozambique. Mol Biol Rep. 2015;42(1):71-6. https://doi.org/10.1007/s11033-014-3741-1 PMid:25239251 DOI: https://doi.org/10.1007/s11033-014-3741-1

Araujo Z, Palacios A, Biomon R, Rivas-Santiago B, Serrano CJ, Enciso-Moreno L, et al. Concordance between IFNγ gene +874 A/T polymorphism and interferon-γ expression in a TB-endemic indigenous setting. Rev Soc Bras Med Trop. 2017;50(2):199- 207. https://doi.org/10.1590/0037-8682-0398-2016 PMid:28562756 DOI: https://doi.org/10.1590/0037-8682-0398-2016

Vallinoto AC, Graça ES, Araújo MS, Azevedo VN, CayresVallinoto I, Machado LF, et al. IFNG +874T/A polymorphism and cytokine plasma levels are associated with susceptibility to Mycobacterium tuberculosis infection and clinical manifestation of tuberculosis. Hum Immunol. 2010;71(7):692-6. https://doi.org/10.1016/j.humimm.2010.03.008 PMid:20353805 DOI: https://doi.org/10.1016/j.humimm.2010.03.008

Lio D, Marino V, Serauto A, Gioia V, Scola L, Crivello A, et al. Genotype frequencies of the +874T→A single nucleotide polymorphism in the first intron of the interferon-γ gene in a sample of Sicilian patients affected by tuberculosis. Eur J Immunogenet. 2002;29(5):371-4. https://doi.org/10.1046/j.1365-2370.2002.00327.x PMid:12358843 DOI: https://doi.org/10.1046/j.1365-2370.2002.00327.x

Mansouri F, Heydarzadeh R, Yousefi S. The association of interferon-gamma, interleukin-4 and interleukin-17 singlenucleotide polymorphisms with susceptibility to tuberculosis. Apmis. 2018;126(3):227-33. https://doi.org/10.1111/apm.12810 PMid:29372577 DOI: https://doi.org/10.1111/apm.12810

Rossouw M, Nel HJ, Cooke GS, Van Helden PD, Hoal EG. Association between tuberculosis and a polymorphic NFκB binding site in the interferon γ gene. Lancet. 2003;361(9372):1871- 2. https://doi.org/10.1016/s0140-6736(03)13491-5 PMid:12788577 DOI: https://doi.org/10.1016/S0140-6736(03)13491-5

Ben Selma W, Harizi H, Bougmiza I, Hannachi N, Ben Kahla I, Zaieni R, et al. Interferon gamma +874T/A polymorphism is associated with susceptibility to active pulmonary tuberculosis development in tunisian patients. DNA Cell Biol. 2011;30(6):379- 87. https://doi.org/10.1089/dna.2010.1157 PMid:21332391 DOI: https://doi.org/10.1089/dna.2010.1157

Ryckman K, Williams SM. Calculation and use of the HardyWeinberg model in association studies. Curr Protoc Hum Genet. 2008;57:1-11. DOI: https://doi.org/10.1002/0471142905.hg0118s57

Daulay RS, Daulay RM. Interferon-gamma and interleukin-10 profile of children with tuberculosis in North Sumatera, Indonesia. IOP Conf Ser Earth Environ Sci. 2018;125(1):970-5. PMid:12531774 DOI: https://doi.org/10.1088/1755-1315/125/1/012147

Sinaga BY, Amir Z. Tumor necrosis factor-alpha-308G/a polymorphism associated with increased risk for pulmonary tuberculosis in Medan city, Indonesia. Open Access Maced J Med Sci. 2021;9:7-11. DOI: https://doi.org/10.3889/oamjms.2021.5559

Sinaga BY, Amin M, Siregar Y. Correlation between Vitamin D receptor gene FOKI and BSMI polymorphisms and the susceptibility to pulmonary tuberculosis in an indonesian Batakethnic Population. Acta Med Indones. 2014;46(4):275-82.

Downloads

Published

2021-08-09

How to Cite

1.
Kaban SM, Sinaga BYM, Nasution TA. Association of Polymorphism +874 T/A Interferon Gamma Gene with Susceptibility to Pulmonary Tuberculosis in Medan, Indonesia. Open Access Maced J Med Sci [Internet]. 2021 Aug. 9 [cited 2024 Nov. 21];9(A):515-9. Available from: https://oamjms.eu/index.php/mjms/article/view/6480