CARD15 Gene 3020insC Mutation with Inflammatory Bowel Diseases Patients in the Black Sea Region of Turkey

Authors

  • Ilhami Gok Department of Bioengineering, Faculty of Engineering & Architecture, Kafkas University, Kars
  • Fahri Ucar Departments of Medical Biology & Genetics, School of Medicine, Akdeniz University, Antalya
  • Orhan Ozgur Department Internal Medicine, Divisions of Gastroenterology Karadeniz Technical University, Trabzon
  • Altay Celebi Department Internal Medicine, Division of Gastroenterology, School of Medicine, Kocaeli University, Kocaeli
  • Omer Sentürk Department Internal Medicine, Division of Gastroenterology, School of Medicine, Kocaeli University, Kocaeli
  • Sadettin Hulagu Department Internal Medicine, Division of Gastroenterology, School of Medicine, Kocaeli University, Kocaeli

DOI:

https://doi.org/10.3889/oamjms.2014.033

Keywords:

Inflammatory Bowel Diseases, Card15 Gene Mutation, Black Sea Region population, Turkey.

Abstract

BACKGROUND: The role of the CARD15 gene 3020insC frameshift mutation in the pathogenesis of inflammatory bowel diseases (IBD) investigated without a definitive conclusion. The incidence of this mutation in Turkish patients with Crohn’s disease is not known.

OBJECTIVE: We investigated whether the CARD15/NOD2 3020insC frameshift mutation is a risk factor for patients with inflammatory bowel disease in Black Sea Region population in Turkey.

METHODS: We studied 3020insC mutation of CARD15/NOD2 gene by allele-specific multiplex PCR in 69 patients with IBD (18 Crohn’s disease [CD] and 51 ulcerative colitis [UC]) and 101 ethnically matched healthy controls.

RESULTS: CARD15/NOD2 3020insC frameshift mutation was positive in 7/18 (38.8 %), 13/51 (25.5 %), and 4/101 (4 %) of CD, UC, and healthy control groups, respectively. None of the controls or patients with Crohn’s disease and ulcerative colitis was homozygous for this mutations.

CONCLUSION: This study is to investigate a relation between CARD15/NOD2 3020insC frameshift mutation and in patients with IBD in the Turkish Population. C-insertion frameshift mutation is a major contributor to the susceptibility to both CD and UC, but it is not specific to patients with CD in Turkish population.

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References

Zhong Y, Kinio A, Saleh M. Functions of NOD-Like Receptors in Human Diseases. Front Immunol. 2013;16(4):333-37. DOI: https://doi.org/10.3389/fimmu.2013.00333

Murillo L, Bart J, Crusius A, VanBodegraven A A, Alizadeh BZ Pena AS. CARD15 Gene and Classification of Crohn’s Disease. Immunogenetics.2002 ;54: 59-61. DOI: https://doi.org/10.1007/s00251-002-0440-1

Crawford NP, Colliver DW, Eichenberger MR, Funke A A, Kolodko V, Cobbs GA, Petras RE, Galandiuk S.CARD15 genotype-phenotype relationships in a small inflammatory bowel disease population with severe disease affection status. Dig Dis Sci. 2007;10:2716-24. DOI: https://doi.org/10.1007/s10620-006-9208-z

Hugot JP, Chamaillard M, Zouali H, Lesage S, Cezard JP, Belaiches J. Association of NOD2 leucine-rich repeat variants with susceptibility to Crohn’s disease. Nature. 2001; 411: 599-603. DOI: https://doi.org/10.1038/35079107

Ogura Y, Bonen DK, Inohara N, Nicolae DL, Chen FF, Ramos R. A frameshift mutation in NOD2 associated with susceptibility to Crohn’s disease. Nature. 2001; 411: 603-06. DOI: https://doi.org/10.1038/35079114

Lin Z, Hegarty JP, John G, Berg A, Wang Z, Sehgal R, Pastor DM, Wang Y, Harris LR, Poritz LS , Schreiber S, Koltun WA. NOD2 mutations affect muramyl dipeptide stimulation of human B lymphocytes and interact with otherIBD-associated genes. Dig Dis Sci. 2013;9:2599-607. DOI: https://doi.org/10.1007/s10620-013-2696-8

Farrel RJ, Peppercorn MA. Ulcerative Colitis. Lancet. 2002; 359: 331-40. DOI: https://doi.org/10.1016/S0140-6736(02)07499-8

Kanaan Z, Ahmad S, Bilchuk N, Vahrenhold C, Pan J, Galandiuk S. Perianal Crohn's disease: predictive factors and genotype-phenotype correlations. Dig Surg. 2012; 2:107-14. DOI: https://doi.org/10.1159/000335745

Nimmo ER, Stevens C, Phillips AM, Smith A, Drummond HE, Noble CL, Quail M, Davies G, Aldhous MC, Wilson DC, Satsangi J. TLE1 modifies the effects of NOD2 in the pathogenesis of Crohn's disease. Gastroenterology. 2011; 3:972-981. DOI: https://doi.org/10.1053/j.gastro.2011.05.043

Guo Q S , Xia B, JiangY, Qu Y, Li J. NOD2 3020 insC frameshift mutation is not associated with inflammatory bowel disease in Chinese patients of Han nationality. World J Gastroenterol. 2004;10:1069-71. DOI: https://doi.org/10.3748/wjg.v10.i7.1069

Gasche C, Scholmerich J, Brynskov J, D'Haens G, Hanauer SB, Irvine EJ. A simple classification of Crohn’s disease: report of the Working Party for the World Congresses of Gastroenterology, Vienna 1998. Inflamm Bowel Dis. 2000;6: 8-15. DOI: https://doi.org/10.1097/00054725-200002000-00002

Rapley R, Walker JM. The Nucleic Acid Protocol Handbook. Humana Press. Ottowa: New Jersey, 2008; 3-29.

Cooney R, Jewell D. The genetic basis of inflammatory bowel disease. Dig Dis. 2009; 4:428-42. DOI: https://doi.org/10.1159/000234909

Petermann I, Huebner C, Browning BL, Gearry RB, Barclay ML, Kennedy M, Roberts R., Shelling AN, Philpott M, Han DY, Ferguson LR. Interactions among genes influencing bacterial recognition increase IBD risk in a population-based New Zealand cohort. Hum Immunol. 2009; 6:440-6. DOI: https://doi.org/10.1016/j.humimm.2009.03.002

Rigoli L, Romano C, Caruso RA, Lo Presti MA, Di Bella C, Procopio V, Lo Giudice G, Amorini M, Costantino G, Sergi MD, Cuppari C, Calabro GE, Gallizzi R, Salpietro CD, Fries W. Clinical significance of NOD2/CARD15 and Toll-like receptor 4 gene single nucleotide polymorphisms in inflammatory bowel disease. World J Gastroenterol. 2008; 28:4454-61. DOI: https://doi.org/10.3748/wjg.14.4454

André MF, Aumaître O, Piette JC, Grateau G, Cardoso MC, Ouchchane L, Kémény JL, Dastugue B, Delpech M, Creveaux I. Analysis of the NOD2/CARD15 gene in patients affected with the aseptic abscesses syndrome with or without inflammatory bowel disease. Dig Dis Sci. 2008;2:490-9. DOI: https://doi.org/10.1007/s10620-007-9871-8

Yamazaki K, Takazoe M, Tanaka T, Kazumori T. Nakamura,Y. Absence of Mutation in the NOD2/CARD15 Gene Among 483 Japanese Patient With Crohn’s Disease. J Hum Genet. 2002;47: 469-72. DOI: https://doi.org/10.1007/s100380200067

Croucher PJ, Mascheretti S, Hampe J, Huse K, Frenzel H, Stoll M. Haplotype structure and association to Crohn’s disease of CARD15 mutations in two ethnically divergent populations. Eur J Hum Genet. 2003; 1:6–16. DOI: https://doi.org/10.1038/sj.ejhg.5200897

Motamed F, Najafi M, Taghvaei M, Moazzami K, Farahmand F, Khodadad A, Fallahi GH, Parvaneh N, Khatami GR, Rezaei N. NOD2 sequencing in Iranian children with Crohn's disease. Z Gastroenterol. 2011;12:1526-8 DOI: https://doi.org/10.1055/s-0031-1281825

Csillag C, Nielsen OH, Borup R, Olsen J, Bjerrum JT, Nielsen FC. CARD15 status and familial predisposition for Crohn's disease and colonic gene expression. Dig Dis Sci. 2007; 8:1783-9. DOI: https://doi.org/10.1007/s10620-006-9737-5

Giachino D, van Duist MM, Regazzoni S. Analysis of the CARD15 variants R702W, G908R and L1007fs in Italian IBD patients. Eur J Hum Genet. 2004;12: 206-12. DOI: https://doi.org/10.1038/sj.ejhg.5201130

Annese V, Palmieri O, Latiano A, Campieri M, Caprilli R, Cucchiana S. Frequency of NOD2/CARD15variants in both sporadic and familial cases of Crohn'sdisease across Italy. An Italian Group for Inflammatory Bowel Disease Study. Dig Liver Dis. 2004; 36:121-124. DOI: https://doi.org/10.1016/j.dld.2003.10.010

Latiano A, Palmieri O, Corritore G, Valvano MR, Bossa F, Cucchiara S, Castro M, Riegler G, De Venuto D, D'Incà R, Andriulli A, Annese V. Variants at the 3p21 locus influence susceptibility and phenotype both in adults and early-onset patients with inflammatory bowel disease. Inflamm Bowel Dis. 2010;16(7):1108-17. DOI: https://doi.org/10.1002/ibd.21176

Ideström M, Rubio C, Granath F, Finkel Y, Hugot JP. CARD15 mutations are rare in Swedish pediatric Crohn disease. J Pediatr Gastroenterol Nutr. 2005;4:456-1. DOI: https://doi.org/10.1097/01.MPG.0000150423.38210.2E

Hugot JP. CARD15/NOD2 mutations in Crohn’s disease. Ann Ny Acad Sci. 2006; 1:9–18. DOI: https://doi.org/10.1196/annals.1326.011

Leung CH, Lam W, Ma DL, Gullen EA, Cheng YC. Butyrate mediates nucleotide-binding and oligomerisation domain (NOD) 2-dependent mucosal immune responses against peptidoglycan. Eur J Immunol. 2009 ;12:3529-37. DOI: https://doi.org/10.1002/eji.200939454

Abraham C, Cho JH. Functional consequences of NOD2 (CARD15) mutations. Inflamm Bowel Dis. 2006; 7:641–50. DOI: https://doi.org/10.1097/01.MIB.0000225332.83861.5f

28.Tsianos EV, Katsanos KH, Tsianos VE. Role of genetics in the diagnosis and prognosis of Crohn's disease.World J Gastroenterol. 2011; 48:5246-59. DOI: https://doi.org/10.3748/wjg.v17.i48.5246

Cho J.H. Abraham C. Inflammatory bowel disease genetics: Nod2. Annu Rev Med. 2007; 58:401–16. DOI: https://doi.org/10.1146/annurev.med.58.061705.145024

Cucchiara S, Latiano A, Palmieri O, Staiano AM, D'Incà R, Guariso G, Vieni G, Rutigliano V, Borrelli O, Valvano MR, Annese V. Role of CARD15, DLG5 and OCTN genes polymorphisms in children with inflammatory bowel diseases. World J Gastroenterol. 2007; 8:1221-9. DOI: https://doi.org/10.3748/wjg.v13.i8.1221

Linderson Y, Bresso F, Buentke E, Pettersson S, D'Amato M. Functional interaction of CARD15/NOD2 and Crohn’s disease-associated TNFalpha-beta polymorphisms. Int J Colorect Dis. 2005;4:305–11. DOI: https://doi.org/10.1007/s00384-004-0732-z

Leong RW, Armuzzi A, Ahmad T, Wong ML, Tse P, Jewell DP. NOD2/CARD15 gene polymorphisms and Crohn’s disease in the Chinese population. Aliment Pharmacol Ther. 2003; 17: 1465-70 DOI: https://doi.org/10.1046/j.1365-2036.2003.01607.x

Cukovic-Cavka S, Vermeire S, Hrstic I, Claessens G, Kolacek S, Jakic-Razumovic J, Krznaric Z, Grubelic K, Radic D, Misak Z, Jadresin O, Rutgeerts P, Vucelic B. NOD2/CARD15 mutations in Croatian patients with Crohn's disease: prevalence and genotype-phenotype relationship. Eur J Gastroenterol Hepatol. 2006;18(8):895-9. DOI: https://doi.org/10.1097/00042737-200608000-00016

Leung E, Hong J, Fraser AG, Leung,E, Hong J, Fraser AG. Polymorphisms of CARD15/NOD2 and CD14 genes in New Zealand Crohn’s disease patients. Immunol cell biol. 2005;5:498–503. DOI: https://doi.org/10.1111/j.1440-1711.2005.01362.x

Cukovic-Cavka M, Peña A S. Clinical applications of NOD2/CARD15 mutations in Crohn's disease. Acta Gastroenterol Latinoam. 2007;1:49-54.

Tekin F, Berdeli A, Ozutemiz O, Coker A. Evaluation of the association of NOD2/CARD15 gene polymorphisms with clinical course of Turkish Crohn’s disease patients. İnt J Med Medical Sci. 2009; (5):211-214.

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Published

2014-05-31

How to Cite

1.
Gok I, Ucar F, Ozgur O, Celebi A, Sentürk O, Hulagu S. CARD15 Gene 3020insC Mutation with Inflammatory Bowel Diseases Patients in the Black Sea Region of Turkey. Open Access Maced J Med Sci [Internet]. 2014 May 31 [cited 2024 Apr. 26];2(2):215-8. Available from: https://oamjms.eu/index.php/mjms/article/view/oamjms.2014.033

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Section

A - Basic Science